STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU46895.1Hypothetical protein. (87 aa)    
Predicted Functional Partners:
EAU46896.1
Hypothetical protein.
 
    0.991
EAU45670.1
COG2841 Uncharacterized protein conserved in bacteria.
  
    0.958
EAU46616.1
CTP synthetase.
  
    0.948
EAU43619.1
Polyphosphate kinase 2.
   
    0.941
EAU44394.1
Polyphosphate kinase 2, putative.
   
    0.941
EAU46897.1
Hypothetical protein.
 
     0.908
EAU44681.1
COG1734 DnaK suppressor protein.
  
    0.874
EAU45741.1
Iron-sulfur-binding protein, RdxA/RdxB/FixG family; COG0348 Polyferredoxin.
   
    0.776
EAU45737.1
COG4736 Cbb3-type cytochrome oxidase, subunit 3.
  
    0.715
EAU46338.1
Antibiotic biosynthesis monooxygenase domain protein; COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides.
  
     0.711
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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