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ubiE protein (Pelagibaca bermudensis) - STRING interaction network
"ubiE" - Demethylmenaquinone methyltransferase in Pelagibaca bermudensis
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ubiEDemethylmenaquinone methyltransferase ; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) (250 aa)    
Predicted Functional Partners:
R2601_11996
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein (417 aa)
   
  0.993
R2601_19397
2-octaprenyl-6-methoxyphenyl hydroxylase (397 aa)
   
  0.991
R2601_14455
Probable protein kinase UbiB ; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis (510 aa)
   
 
  0.966
ubiG
3-demethylubiquinone 3-O-methyltransferase ; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway (250 aa)
   
 
  0.913
ubiA
4-HB polyprenyltransferase ; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate (343 aa)
 
 
  0.882
fpg
DNA-(apurinic or apyrimidinic site) lyase MutM ; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3’- and 5’-phosphates (283 aa)
 
        0.814
R2601_24759
Uncharacterized protein (289 aa)
     
    0.813
R2601_11886
Decaprenyl diphosphate synthase (331 aa)
 
   
  0.770
clpS
ATP-dependent Clp protease adapter protein ClpS ; Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation (120 aa)
 
      0.762
R2601_19235
Uncharacterized protein (232 aa)
   
 
  0.760
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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