STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU48284.1Methyltransferase FkbM family protein; COG0500 SAM-dependent methyltransferases. (229 aa)    
Predicted Functional Partners:
EAU48283.1
HD domain protein; COG1896 Predicted hydrolases of HD superfamily.
       0.669
EAU48282.1
Acetyltransferase, GNAT family protein; COG0456 Acetyltransferases.
       0.668
EAU47499.1
Hypothetical protein; COG3173 Predicted aminoglycoside phosphotransferase.
  
     0.600
EAU44915.1
Hypothetical protein.
  
     0.592
EAU46247.1
Hypothetical protein; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful).
  
     0.581
EAU45614.1
Hypothetical protein.
  
     0.545
EAU47452.1
Methyltransferase, FkbM family protein; COG0500 SAM-dependent methyltransferases.
  
     0.532
ahcY
S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.527
EAU43829.1
Hypothetical protein.
  
     0.509
EAU46994.1
Hypothetical protein; COG1933 Archaeal DNA polymerase II, large subunit.
  
     0.502
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.