STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU45468.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (434 aa)    
Predicted Functional Partners:
EAU45467.1
Hypothetical protein.
 
  
 0.961
EAU45465.1
Undecaprenyl-phosphate galactosephosphotransferase; COG1922 Teichoic acid biosynthesis proteins.
 
  
 0.912
EAU45462.1
COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.853
EAU45461.1
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.849
EAU45458.1
COG0438 Glycosyltransferase.
 
 
  0.824
EAU45459.1
Glucosyltransferase; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.788
EAU45460.1
Glucosyltransferase; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
  
 0.781
EAU47046.1
Mannose-6-phosphate isomerase, type II; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.680
EAU46878.1
Nucleotide sugar epimerase/dehydratase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
  
  
 0.675
EAU45466.1
DNA-binding response regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
    0.634
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.