STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU46642.1COG3523 Uncharacterized protein conserved in bacteria. (1193 aa)    
Predicted Functional Partners:
EAU46643.1
COG3455 Uncharacterized protein conserved in bacteria.
 
 
 0.989
EAU46652.1
COG3517 Uncharacterized protein conserved in bacteria.
 
 
 0.986
EAU46641.1
COG3913 Uncharacterized protein conserved in bacteria.
 
  
 0.964
EAU45635.1
Possible outer membrane protein, OmpA family; COG3455 Uncharacterized protein conserved in bacteria.
 
 
 0.949
EAU46640.1
Probable phosphoprotein phosphatase; COG0631 Serine/threonine protein phosphatase.
 
 
 0.946
EAU46659.1
COG3517 Uncharacterized protein conserved in bacteria.
 
 
 0.896
EAU45627.1
COG3517 Uncharacterized protein conserved in bacteria.
 
 
 0.895
EAU46645.1
COG3522 Uncharacterized protein conserved in bacteria.
 
 
 0.880
EAU45634.1
COG3522 Uncharacterized protein conserved in bacteria.
 
 
 0.879
EAU46660.1
COG3516 Uncharacterized protein conserved in bacteria.
 
 
 0.865
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.