STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU45250.1COG3853 Uncharacterized protein involved in tellurite resistance; Belongs to the TelA family. (400 aa)    
Predicted Functional Partners:
EAU45251.1
Hypothetical protein.
 
  
 0.995
EAU45253.1
Hypothetical protein.
 
  
 0.937
EAU45249.1
Lipoprotein, putative.
 
     0.880
EAU45247.1
COG4260 Putative virion core protein (lumpy skin disease virus).
 
     0.828
EAU45243.1
COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase.
 
     0.802
EAU45255.1
COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
     
 0.725
EAU45252.1
Hypothetical protein.
       0.648
EAU45248.1
Probable bacterial hemoglobin; COG1017 Hemoglobin-like flavoprotein; Belongs to the globin family.
       0.590
EAU44391.1
Hypothetical protein.
  
     0.529
EAU45254.1
Hypothetical protein.
       0.438
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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