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argB protein (Pelagibaca bermudensis) - STRING interaction network
"argB" - NAG kinase in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
argBNAG kinase (297 aa)    
Predicted Functional Partners:
R2601_27218
N-acetyl-glutamate semialdehyde dehydrogenase (324 aa)
 
  0.999
R2601_22631
N-acetyl-glutamate semialdehyde dehydrogenase (314 aa)
 
  0.999
argJ
Arginine biosynthesis bifunctional protein ArgJ ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis- the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate (409 aa)
 
  0.998
R2601_19145
Ornithine carbamoyltransferase ; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (308 aa)
 
 
  0.992
R2601_15397
Arginosuccinase (463 aa)
 
  0.988
argD
Acetylornithine aminotransferase (398 aa)
 
  0.986
R2601_20486
Arginosuccinase (499 aa)
 
  0.975
argG
Citrulline--aspartate ligase (406 aa)
 
   
  0.971
R2601_17202
Uncharacterized protein (227 aa)
              0.887
R2601_17197
Uncharacterized protein (166 aa)
              0.887
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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