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R2601_17784 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17784" - Saccharopine dehydrogenase, putative in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17784Saccharopine dehydrogenase, putative (376 aa)    
Predicted Functional Partners:
R2601_17779
Saccharopine dehydrogenase, putative (351 aa)
   
    0.988
R2601_17774
Phosphoglycerate mutase family protein (217 aa)
 
        0.757
R2601_08848
Putative Ornithine decarboxylase (375 aa)
 
 
  0.671
R2601_24295
Agmatinase (272 aa)
       
  0.668
R2601_23308
Agmatinase, putative (326 aa)
       
  0.668
R2601_17559
Putative agmatinase (332 aa)
       
  0.668
R2601_02313
Arginase (309 aa)
       
  0.668
R2601_25096
Isoprenyl transferase ; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids (241 aa)
 
     
    0.664
R2601_10017
Predicted Orn/Lys/Arg decarboxylase (762 aa)
       
    0.660
R2601_21231
Uncharacterized protein (109 aa)
   
          0.639
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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