STRINGSTRING
R2601_17799 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_17799" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_17799Uncharacterized protein (58 aa)    
Predicted Functional Partners:
ctaB
Heme O synthase ; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (316 aa)
              0.866
ctaG
Cytochrome c oxidase assembly protein CtaG ; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I (194 aa)
              0.866
R2601_17789
Cytochrome c oxidase, aa3-type, subunit III (266 aa)
              0.780
R2601_08466
Uncharacterized protein (77 aa)
   
          0.724
R2601_19342
Uncharacterized protein (171 aa)
   
          0.718
R2601_18558
Uncharacterized protein (71 aa)
   
          0.663
R2601_17809
Cytochrome c oxidase subunit 2 ; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (287 aa)
              0.660
R2601_19260
Uncharacterized protein (150 aa)
   
          0.628
R2601_26571
Probable bacterioferritin-associated ferredoxin (92 aa)
   
          0.627
R2601_23338
Uncharacterized protein (198 aa)
   
          0.614
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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