Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAU44175.1 | EAU44674.1 | R2601_19352 | R2601_18508 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | Hypothetical protein. | 0.639 |
EAU44175.1 | EAU46630.1 | R2601_19352 | R2601_19260 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | Hypothetical protein. | 0.609 |
EAU44175.1 | EAU47012.1 | R2601_19352 | R2601_17799 | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | Hypothetical protein. | 0.558 |
EAU44674.1 | EAU44175.1 | R2601_18508 | R2601_19352 | Hypothetical protein. | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | 0.639 |
EAU44674.1 | EAU45249.1 | R2601_18508 | R2601_16967 | Hypothetical protein. | Lipoprotein, putative. | 0.461 |
EAU44674.1 | EAU46977.1 | R2601_18508 | R2601_17624 | Hypothetical protein. | Hypothetical protein. | 0.614 |
EAU44674.1 | EAU47012.1 | R2601_18508 | R2601_17799 | Hypothetical protein. | Hypothetical protein. | 0.615 |
EAU45249.1 | EAU44674.1 | R2601_16967 | R2601_18508 | Lipoprotein, putative. | Hypothetical protein. | 0.461 |
EAU45249.1 | EAU47012.1 | R2601_16967 | R2601_17799 | Lipoprotein, putative. | Hypothetical protein. | 0.471 |
EAU46630.1 | EAU44175.1 | R2601_19260 | R2601_19352 | Hypothetical protein. | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | 0.609 |
EAU46630.1 | EAU47012.1 | R2601_19260 | R2601_17799 | Hypothetical protein. | Hypothetical protein. | 0.449 |
EAU46977.1 | EAU44674.1 | R2601_17624 | R2601_18508 | Hypothetical protein. | Hypothetical protein. | 0.614 |
EAU46977.1 | EAU47012.1 | R2601_17624 | R2601_17799 | Hypothetical protein. | Hypothetical protein. | 0.449 |
EAU47010.1 | EAU47012.1 | R2601_17789 | R2601_17799 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | Hypothetical protein. | 0.847 |
EAU47010.1 | EAU47014.1 | R2601_17789 | R2601_17809 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | Cytochrome c oxidase polypeptide II precursor (Cytochrome AA3 subunit 2); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). | 0.999 |
EAU47010.1 | EAU47015.1 | R2601_17789 | R2601_17814 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | TldD/PmbA family protein; COG0312 Predicted Zn-dependent proteases and their inactivated homologs. | 0.571 |
EAU47010.1 | ctaB | R2601_17789 | R2601_17804 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily. | 0.999 |
EAU47010.1 | ctaG | R2601_17789 | R2601_17794 | COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3. | Cytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.995 |
EAU47012.1 | EAU44175.1 | R2601_17799 | R2601_19352 | Hypothetical protein. | Peptidoglycan binding domain protein; COG2951 Membrane-bound lytic murein transglycosylase B. | 0.558 |
EAU47012.1 | EAU44674.1 | R2601_17799 | R2601_18508 | Hypothetical protein. | Hypothetical protein. | 0.615 |
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