STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU45510.1COG4188 Predicted dienelactone hydrolase. (351 aa)    
Predicted Functional Partners:
EAU44045.1
Patatin-like phospholipase family protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
    
 0.501
EAU44697.1
Similar to suppressor of E. coli rpoH thermosensitive mutation transmembrane protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
    
 0.501
EAU46216.1
Phospholipase, patatin-like family protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
    
 0.501
EAU45801.1
Acyltransferase family protein; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
     
 0.472
EAU44601.1
Acyltransferase, putative; COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
     
 0.472
nnrE
YjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]
       0.439
EAU45511.1
Excinuclease ABC subunit B; COG0528 Uridylate kinase.
       0.404
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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