STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU45549.1ABC transporter permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components. (266 aa)    
Predicted Functional Partners:
EAU45550.1
ABC transporter ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
  0.956
EAU45548.1
ABC transporter permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
  0.950
EAU45547.1
Extracellular solute-binding protein, family 5; COG0747 ABC-type dipeptide transport system, periplasmic component.
  0.930
EAU47602.1
Probable oligopeptide atp-binding abc transporter protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.928
EAU46129.1
Peptide ABC transporter, ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.924
EAU48013.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.921
EAU44786.1
Peptide ABC transporter, ATP-binding protein; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.907
EAU46488.1
DppD; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.896
EAU44426.1
ABC transporter, ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.889
EAU46128.1
Peptide ABC transporter, ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
  0.877
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.