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tmk protein (Pelagibaca bermudensis) - STRING interaction network
"tmk" - dTMP kinase in Pelagibaca bermudensis
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
tmkdTMP kinase ; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis (208 aa)    
Predicted Functional Partners:
thyX
Thymidylate synthase ThyX ; Catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate (304 aa)
   
 
  0.988
tdk
Thymidine kinase (203 aa)
     
 
  0.984
ndk
Nucleoside-2-P kinase ; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (140 aa)
   
 
  0.981
R2601_19599
DNA polymerase III subunit delta (372 aa)
 
 
  0.970
surE
Nucleoside 5’-monophosphate phosphohydrolase ; Nucleotidase that shows phosphatase activity on nucleoside 5’-monophosphates (261 aa)
   
    0.943
R2601_09932
Deoxyuridine 5’-triphosphate nucleotidohydrolase ; This enzyme is involved in nucleotide metabolism- it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA (145 aa)
   
 
  0.925
R2601_19609
D-alanyl-D-alanine carboxypeptidase (391 aa)
              0.914
R2601_18628
Ribonucleoside-diphosphate reductase subunit beta ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (326 aa)
   
  0.909
R2601_18633
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (707 aa)
   
 
  0.883
R2601_10309
Ribonucleoside-diphosphate reductase, putative (762 aa)
   
 
  0.883
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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