STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU47610.1Toxin secretion ABC transporter protein, HlyB family; COG4618 ABC-type protease/lipase transport system, ATPase and permease components. (521 aa)    
Predicted Functional Partners:
EAU47612.1
HlyD family secretion protein; COG0845 Membrane-fusion protein.
 0.991
EAU47294.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
 0.964
EAU44061.1
Type I secretion membrane fusion protein, HlyD family; COG0845 Membrane-fusion protein.
 0.960
EAU48371.1
COG2375 Siderophore-interacting protein.
   
  0.894
EAU44802.1
COG2375 Siderophore-interacting protein.
   
  0.894
EAU47611.1
ABC transporter, ATP-binding/permease protein; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
    
0.836
EAU48377.1
ABC multidrug efflux transporter, fused ATPase and inner membrane subunits; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
 
0.797
EAU44120.1
ABC transporter, ATP binding/permease protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
  0.797
EAU48252.1
ABC transporter, transmembrane ATP-binding protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
  0.797
EAU48253.1
ABC multidrug efflux pump, fused ATPase and inner membrane subunits; COG1132 ABC-type multidrug transport system, ATPase and permease components.
  
  0.797
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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