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R2601_20039 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20039" - Phenylacetic acid degradation-related protein in Pelagibaca bermudensis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20039Phenylacetic acid degradation-related protein (139 aa)    
Predicted Functional Partners:
R2601_20064
Probable enoyl-CoA hydratase/isomerase (253 aa)
 
  0.885
R2601_20034
Acyl-CoA dehydrogenase (384 aa)
   
   
  0.861
R2601_17988
Enoyl-CoA hydratase (634 aa)
 
  0.815
R2601_20049
Thiolase (384 aa)
   
   
  0.806
R2601_20059
Uncharacterized protein (287 aa)
         
  0.804
R2601_18553
Enoyl-CoA hydratase/isomerase-3-hydroxyacyl-CoA dehydrogenase, 3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein (666 aa)
   
  0.790
R2601_20069
Uncharacterized protein (483 aa)
              0.783
R2601_20054
CoA-binding protein (706 aa)
              0.783
R2601_20044
Uncharacterized protein (126 aa)
              0.783
R2601_10414
Riboflavin biosynthesis protein RibD ; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate (350 aa)
   
 
    0.773
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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