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R2601_20306 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_20306" - Probable aminopeptidase protein in Pelagibaca bermudensis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_20306Probable aminopeptidase protein (412 aa)    
Predicted Functional Partners:
R2601_20301
Glycoside hydrolase, family 25 (283 aa)
              0.591
R2601_02868
Glyoxalase family protein (249 aa)
   
          0.492
R2601_08963
Oligoendopeptidase F (608 aa)
         
  0.462
R2601_08206
Asp/Glu/Hydantoin racemase family protein (247 aa)
              0.451
R2601_06128
Putative decarboxylase (246 aa)
              0.451
glmU
Bifunctional protein GlmU ; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain (449 aa)
   
          0.425
R2601_21697
Salicylate hydroxylase (392 aa)
       
    0.408
R2601_19397
2-octaprenyl-6-methoxyphenyl hydroxylase (397 aa)
       
    0.408
R2601_11996
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein (417 aa)
       
    0.408
R2601_05333
Phenol 2-monooxygenase (640 aa)
       
    0.408
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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