Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAU43449.1 | EAU43450.1 | R2601_20301 | R2601_20306 | Glycoside hydrolase, family 25; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | Probable aminopeptidase protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | 0.519 |
EAU43450.1 | EAU43449.1 | R2601_20306 | R2601_20301 | Probable aminopeptidase protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | Glycoside hydrolase, family 25; COG3757 Lyzozyme M1 (1,4-beta-N-acetylmuramidase). | 0.519 |
EAU43450.1 | EAU44047.1 | R2601_20306 | R2601_11866 | Probable aminopeptidase protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. | 0.400 |
EAU43450.1 | EAU45666.1 | R2601_20306 | R2601_08963 | Probable aminopeptidase protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | COG1164 Oligoendopeptidase F. | 0.442 |
EAU44047.1 | EAU43450.1 | R2601_11866 | R2601_20306 | Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. | Probable aminopeptidase protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | 0.400 |
EAU45666.1 | EAU43450.1 | R2601_08963 | R2601_20306 | COG1164 Oligoendopeptidase F. | Probable aminopeptidase protein; COG2309 Leucyl aminopeptidase (aminopeptidase T). | 0.442 |