STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU43452.1ABC sugar transporter, inner membrane subunit; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (356 aa)    
Predicted Functional Partners:
EAU43451.1
ABC transporter, nucleotide binding/ATPase protein (sugar); COG1129 ABC-type sugar transport system, ATPase component.
  0.988
EAU43453.1
COG1879 ABC-type sugar transport system, periplasmic component.
 
  0.971
EAU48306.1
ABC transporter, substrate binding protein (ribose); COG1879 ABC-type sugar transport system, periplasmic component.
  0.840
rbsA-2
Putative atp-binding abc transporter protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.828
EAU44552.1
Putative ABC transporter ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component.
  0.793
rbsA
ABC transporter, nucleotide binding/ATPase protein (ribose); Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.784
EAU48438.1
ABC transporter, nucleotide binding/ATPase protein (sugar); COG1129 ABC-type sugar transport system, ATPase component.
  0.784
EAU47999.1
Ribose ABC transporter, ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component.
  0.776
EAU47997.1
Probable ABC transporter sugar-binding protein; COG1879 ABC-type sugar transport system, periplasmic component.
  0.774
EAU44779.1
COG1129 ABC-type sugar transport system, ATPase component.
  0.749
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.