STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU45820.1ABC amino acid transporter, inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component. (220 aa)    
Predicted Functional Partners:
EAU45818.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 0.998
EAU45821.1
ABC amino acid transporter, inner membrane subunit; COG0765 ABC-type amino acid transport system, permease component.
 
  
 
0.984
EAU47211.1
COG1126 ABC-type polar amino acid transport system, ATPase component.
 0.978
EAU43983.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein; COG1126 ABC-type polar amino acid transport system, ATPase component.
 0.977
EAU47209.1
Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; Belongs to the bacterial solute-binding protein 3 family.
 0.968
EAU45819.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.938
EAU43981.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, permease protein; COG4597 ABC-type amino acid transport system, permease component.
 
 
 0.923
EAU47183.1
COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.869
EAU46192.1
Putative periplasmic binding abc transporter protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 0.867
EAU43982.1
ABC glutamate/glutamine/aspartate/asparagine transporter, inner membrane subunit BztC; COG0765 ABC-type amino acid transport system, permease component.
 
 
0.824
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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