STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU45826.1ABC transporter component; COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (357 aa)    
Predicted Functional Partners:
EAU45828.1
Iron-binding periplasmic protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
 
 
  0.984
EAU45827.1
Probable ferric iron transport system permease protein; COG1178 ABC-type Fe3+ transport system, permease component.
 
  
  0.981
ugpE-2
ABC transporter, membrane spanning protein (sn-Glycerol-3-phosphate); Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.903
EAU47654.1
Hypothetical protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
 
  0.882
EAU44642.1
ABC Fe+3 siderophore transporter, periplasmic substrate-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
 
  0.882
EAU45922.1
Iron ABC transporter, ATP-binding protein, putative; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
  
  
 
0.877
EAU45832.1
ABC transporter, membrane spanning protein (sn-Glycerol-3-phosphate); COG1175 ABC-type sugar transport systems, permease components.
 
  0.871
ugpE
Binding-protein-dependent transport systems inner membrane component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.822
EAU44687.1
Putative iron(III) ABC transporter, fused inner membrane subunits; COG1178 ABC-type Fe3+ transport system, permease component.
 
  
  0.815
EAU47162.1
ABC sugar transporter, inner membrane subunit; COG1175 ABC-type sugar transport systems, permease components.
  
  0.795
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.