STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU45070.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
EAU45068.1
Hypothetical protein.
       0.784
EAU45063.1
Hypothetical protein.
       0.773
EAU45064.1
Tail fiber protein, putative.
       0.773
EAU45066.1
Tail assembly protein, putative; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
       0.773
EAU45067.1
Hypothetical protein.
       0.773
EAU45069.1
COG5283 Phage-related tail protein.
       0.773
EAU45071.1
Hypothetical protein.
       0.558
EAU45072.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
       0.548
EAU45073.1
Hypothetical protein; COG1012 NAD-dependent aldehyde dehydrogenases.
       0.548
EAU45074.1
Hypothetical protein.
       0.548
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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