STRINGSTRING
R2601_23760 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_23760" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_23760Uncharacterized protein (302 aa)    
Predicted Functional Partners:
R2601_23720
Uncharacterized protein (306 aa)
   
          0.570
R2601_23755
Uncharacterized protein (386 aa)
              0.556
R2601_23750
3-oxoacyl-[acyl-carrier-protein] synthase 2 ; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP (418 aa)
              0.556
R2601_23765
Glyoxalase family protein (126 aa)
              0.555
R2601_06838
Transport secretion system IV, VirD4 protein (641 aa)
   
          0.531
R2601_10249
ISSpo2, transposase (382 aa)
   
          0.503
R2601_08011
Ammonium transporter family protein (93 aa)
   
          0.429
R2601_23745
Predicted glycosyltransferase (266 aa)
              0.418
R2601_12545
Uncharacterized protein (137 aa)
   
          0.417
R2601_05708
ImpB/MucB/SamB family protein (430 aa)
   
          0.416
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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