Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAU44930.1 | EAU44932.1 | R2601_23750 | R2601_23760 | 3-oxoacyl-(acyl carrier protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.495 |
EAU44930.1 | mltG | R2601_23750 | R2601_23755 | 3-oxoacyl-(acyl carrier protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.812 |
EAU44932.1 | EAU44930.1 | R2601_23760 | R2601_23750 | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 3-oxoacyl-(acyl carrier protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.495 |
EAU44932.1 | EAU44933.1 | R2601_23760 | R2601_23765 | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | Glyoxalase family protein; COG0346 Lactoylglutathione lyase and related lyases. | 0.494 |
EAU44932.1 | EAU46207.1 | R2601_23760 | R2601_01878 | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | COG3103 SH3 domain protein. | 0.422 |
EAU44932.1 | EAU47816.1 | R2601_23760 | R2601_06888 | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | COG2963 Transposase and inactivated derivatives. | 0.452 |
EAU44932.1 | mltG | R2601_23760 | R2601_23755 | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 0.495 |
EAU44933.1 | EAU44932.1 | R2601_23765 | R2601_23760 | Glyoxalase family protein; COG0346 Lactoylglutathione lyase and related lyases. | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.494 |
EAU46207.1 | EAU44932.1 | R2601_01878 | R2601_23760 | COG3103 SH3 domain protein. | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.422 |
EAU47816.1 | EAU44932.1 | R2601_06888 | R2601_23760 | COG2963 Transposase and inactivated derivatives. | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.452 |
mltG | EAU44930.1 | R2601_23755 | R2601_23750 | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | 3-oxoacyl-(acyl carrier protein) synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. | 0.812 |
mltG | EAU44932.1 | R2601_23755 | R2601_23760 | Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. | Hypothetical protein; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.495 |