STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU43769.1Alcohol dehydrogenase, zinc-containing; COG1064 Zn-dependent alcohol dehydrogenases. (345 aa)    
Predicted Functional Partners:
EAU48406.1
COG1454 Alcohol dehydrogenase, class IV.
  
 0.955
EAU43643.1
COG1454 Alcohol dehydrogenase, class IV.
  
 0.955
EAU48310.1
Formaldehyde dehydrogenase (glutathione); COG1062 Zn-dependent alcohol dehydrogenases, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
0.942
EAU47086.1
Glutathione-dependent formaldehyde dehydrogenase; COG1062 Zn-dependent alcohol dehydrogenases, class III; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
 
0.942
EAU46387.1
COG1012 NAD-dependent aldehyde dehydrogenases.
  
 
 0.888
EAU45568.1
Fatty acid desaturase family protein.
     
 0.807
EAU47338.1
Alkane-1 monooxygenase, putative.
     
 0.807
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.803
EAU46806.1
Glycerol kinase, putative; COG0554 Glycerol kinase; Belongs to the FGGY kinase family.
    
 0.803
EAU45002.1
COG2010 Cytochrome c, mono- and diheme variants.
   
 
  0.758
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.