Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAU43816.1 | EAU46221.1 | R2601_16745 | R2601_25026 | Putative porin; COG3203 Outer membrane protein (porin). | GfdT protein. | 0.701 |
EAU46220.1 | EAU46221.1 | R2601_25021 | R2601_25026 | DNA-binding response regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | GfdT protein. | 0.865 |
EAU46220.1 | EAU46222.1 | R2601_25021 | R2601_25031 | DNA-binding response regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | COG0642 Signal transduction histidine kinase. | 0.985 |
EAU46220.1 | EAU46537.1 | R2601_25021 | R2601_18795 | DNA-binding response regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Cytochrome c550, putative; COG2010 Cytochrome c, mono- and diheme variants. | 0.457 |
EAU46220.1 | EAU46538.1 | R2601_25021 | R2601_18800 | DNA-binding response regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | 0.600 |
EAU46220.1 | EAU47067.1 | R2601_25021 | R2601_04848 | DNA-binding response regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | Putative sensor histidine kinase protein; COG0642 Signal transduction histidine kinase. | 0.950 |
EAU46221.1 | EAU43816.1 | R2601_25026 | R2601_16745 | GfdT protein. | Putative porin; COG3203 Outer membrane protein (porin). | 0.701 |
EAU46221.1 | EAU46220.1 | R2601_25026 | R2601_25021 | GfdT protein. | DNA-binding response regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.865 |
EAU46221.1 | EAU46222.1 | R2601_25026 | R2601_25031 | GfdT protein. | COG0642 Signal transduction histidine kinase. | 0.955 |
EAU46221.1 | EAU46532.1 | R2601_25026 | R2601_18770 | GfdT protein. | Quinoprotein ethanol dehydrogenase; COG4993 Glucose dehydrogenase. | 0.674 |
EAU46221.1 | EAU46535.1 | R2601_25026 | R2601_18785 | GfdT protein. | Hypothetical protein. | 0.623 |
EAU46221.1 | EAU46536.1 | R2601_25026 | R2601_18790 | GfdT protein. | Hypothetical protein. | 0.628 |
EAU46221.1 | EAU46537.1 | R2601_25026 | R2601_18795 | GfdT protein. | Cytochrome c550, putative; COG2010 Cytochrome c, mono- and diheme variants. | 0.902 |
EAU46221.1 | EAU46538.1 | R2601_25026 | R2601_18800 | GfdT protein. | COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain. | 0.687 |
EAU46221.1 | EAU46540.1 | R2601_25026 | R2601_18810 | GfdT protein. | Regulatory protein, putative; COG3901 Regulator of nitric oxide reductase transcription. | 0.618 |
EAU46221.1 | EAU47067.1 | R2601_25026 | R2601_04848 | GfdT protein. | Putative sensor histidine kinase protein; COG0642 Signal transduction histidine kinase. | 0.675 |
EAU46222.1 | EAU46220.1 | R2601_25031 | R2601_25021 | COG0642 Signal transduction histidine kinase. | DNA-binding response regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain. | 0.985 |
EAU46222.1 | EAU46221.1 | R2601_25031 | R2601_25026 | COG0642 Signal transduction histidine kinase. | GfdT protein. | 0.955 |
EAU46222.1 | EAU46532.1 | R2601_25031 | R2601_18770 | COG0642 Signal transduction histidine kinase. | Quinoprotein ethanol dehydrogenase; COG4993 Glucose dehydrogenase. | 0.583 |
EAU46222.1 | EAU46535.1 | R2601_25031 | R2601_18785 | COG0642 Signal transduction histidine kinase. | Hypothetical protein. | 0.469 |
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