STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU46303.1COG0366 Glycosidases. (577 aa)    
Predicted Functional Partners:
EAU47866.1
COG0531 Amino acid transporters.
    
 0.980
EAU44322.1
COG0531 Amino acid transporters.
    
 0.980
EAU43668.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
   
 0.947
EAU43599.1
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.920
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
  
 
 0.865
EAU43601.1
COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
  
 
 0.841
EAU43791.1
COG0033 Phosphoglucomutase.
    
 0.839
EAU45242.1
Putative Fructokinase; COG0524 Sugar kinases, ribokinase family.
    
 0.825
EAU46460.1
COG1210 UDP-glucose pyrophosphorylase.
    
 0.817
EAU45350.1
COG1210 UDP-glucose pyrophosphorylase.
    
 0.817
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.