STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
EAU47441.1Putative signal transduction histidine kinase with GAF domain; COG2203 FOG: GAF domain. (394 aa)    
Predicted Functional Partners:
EAU46970.1
Two-component hybrid sensor and regulator; COG5002 Signal transduction histidine kinase.
 
 0.993
EAU43897.1
Cytoplasmic sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
  
 0.992
EAU45039.1
Sensor histidine kinase with multiple PAS and a response regulator receiver domain; COG2202 FOG: PAS/PAC domain.
 
 0.984
EAU45463.1
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
  
 0.978
EAU46531.1
Sensor protein fixL; COG2202 FOG: PAS/PAC domain.
 
 0.976
EAU47538.1
Methyl-accepting chemotaxis protein McpH; COG2202 FOG: PAS/PAC domain.
 
 
 0.971
EAU46530.1
Hypothetical protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
    
 0.965
EAU46521.1
Chemotaxis multidomain, CheB methylesterase/CheR, Methylase; COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain.
 
 
0.964
EAU45356.1
Phosphate regulon sensor histidine kinase, putative; COG0642 Signal transduction histidine kinase.
  
 0.959
EAU47060.1
Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine; COG0642 Signal transduction histidine kinase.
  
 0.943
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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