STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU47453.1Glycosyl transferase, group 2 family protein. (350 aa)    
Predicted Functional Partners:
EAU47450.1
Hypothetical protein.
 
     0.948
EAU47232.1
precorrin-8X methylmutase; COG2082 Precorrin isomerase.
  
 
 0.941
EAU47452.1
Methyltransferase, FkbM family protein; COG0500 SAM-dependent methyltransferases.
     0.919
EAU47238.1
COG2875 Precorrin-4 methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.903
EAU47449.1
Hypothetical protein.
 
    
0.845
EAU47451.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
    
0.835
EAU47448.1
Hypothetical protein.
 
    
0.824
EAU47234.1
COG1010 Precorrin-3B methylase.
  
  
 0.820
EAU47235.1
COG2099 Precorrin-6x reductase.
  
 
 0.804
EAU47233.1
COG2243 Precorrin-2 methylase; Belongs to the precorrin methyltransferase family.
  
  
 0.741
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.