STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU43730.1ABC transporter, nucleotide binding/ATPase protein; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components. (521 aa)    
Predicted Functional Partners:
EAU43731.1
Hypothetical protein; COG4988 ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components.
 
 
0.998
EAU43728.1
COG1294 Cytochrome bd-type quinol oxidase, subunit 2.
 
  
 0.988
EAU43729.1
COG1271 Cytochrome bd-type quinol oxidase, subunit 1.
 
  
 0.974
EAU43727.1
ybgT protein.
 
  
 0.917
EAU44624.1
COG1294 Cytochrome bd-type quinol oxidase, subunit 2.
  
  
 0.916
EAU44623.1
COG1271 Cytochrome bd-type quinol oxidase, subunit 1.
  
  
 0.830
EAU43732.1
COG1959 Predicted transcriptional regulator.
 
     0.530
EAU47138.1
COG2832 Uncharacterized protein conserved in bacteria.
    
  0.509
metN
ABC D-methionine uptake transporter, ATPase subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.432
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.