STRINGSTRING
R2601_26936 protein (Pelagibaca bermudensis) - STRING interaction network
"R2601_26936" - Uncharacterized protein in Pelagibaca bermudensis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R2601_26936Uncharacterized protein (269 aa)    
Predicted Functional Partners:
R2601_26931
Peroxiredoxin (175 aa)
              0.810
R2601_26926
Uncharacterized protein (1097 aa)
              0.732
R2601_26941
Peptidase, M23/M37 family protein (415 aa)
              0.687
R2601_26946
Uncharacterized protein (175 aa)
              0.598
queA
Queuosine biosynthesis protein QueA ; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) (349 aa)
              0.545
R2601_26916
Uncharacterized protein (426 aa)
 
          0.459
R2601_07198
Membrane protein (457 aa)
              0.450
R2601_09527
HAD-superfamily hydrolase, subfamily IA, variant 1 (225 aa)
 
        0.438
R2601_26391
Glutamate-ammonia-ligase adenylyltransferase ; Adenylation and deadenylation of glutamate--ammonia ligase (937 aa)
              0.416
Your Current Organism:
Pelagibaca bermudensis
NCBI taxonomy Id: 314265
Other names: P. bermudensis HTCC2601, Pelagibaca, Pelagibaca Cho and Giovannoni 2006, Pelagibaca bermudensis, Pelagibaca bermudensis Cho and Giovannoni 2006, Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601
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