STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAU45998.1COG4950 Uncharacterized protein conserved in bacteria. (160 aa)    
Predicted Functional Partners:
EAU45999.1
Oxidoreductase; COG2072 Predicted flavoprotein involved in K+ transport.
 
     0.955
EAU45996.1
Hypothetical protein.
 
     0.954
EAU45997.1
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.950
EAU45995.1
Putative ABC transporter periplasmic spermidineputrescine-binding protein; COG0687 Spermidine/putrescine-binding periplasmic protein.
 
     0.909
EAU47768.1
Oxidoreductase, FAD-binding, putative; COG0369 Sulfite reductase, alpha subunit (flavoprotein).
   
    0.870
EAU46000.1
Probable NreB protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.824
EAU47231.1
CobG; COG0155 Sulfite reductase, beta subunit (hemoprotein).
  
    0.790
EAU46001.1
Hypothetical protein; COG0520 Selenocysteine lyase.
 
     0.777
EAU44835.1
COG0155 Sulfite reductase, beta subunit (hemoprotein).
   
    0.749
EAU45994.1
Probable spermidineputrescine ABC transporter permease protein; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
     0.725
Your Current Organism:
Salipiger bermudensis
NCBI taxonomy Id: 314265
Other names: Pelagibaca bermudensis HTCC2601, Pelagibaca bermudensis str. HTCC2601, Pelagibaca bermudensis strain HTCC2601, Roseovarius sp. HTCC2601, S. bermudensis HTCC2601, Salipiger bermudensis HTCC2601
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.