STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT09447.1Putative RNA methylase; COG0827 Adenine-specific DNA methylase. (127 aa)    
Predicted Functional Partners:
EAT08610.1
Hypothetical protein.
  
    0.635
EAT10315.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.589
EAT10603.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.523
EAT09446.1
ISPsy20, transposase IstA; COG4584 Transposase and inactivated derivatives.
       0.519
EAT09445.1
ISPsy20, transposase IstB; COG1484 DNA replication protein.
       0.476
EAT07638.1
Hypothetical protein.
  
     0.467
EAT07789.1
COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.404
Your Current Organism:
Sphingomonas sp. SKA58
NCBI taxonomy Id: 314266
Other names: S. sp. SKA58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.