STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT07910.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (962 aa)    
Predicted Functional Partners:
EAT07817.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
 
  0.748
EAT10422.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.741
EAT10266.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.738
EAT10417.1
Putative TonB-dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.734
EAT10541.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.733
EAT08834.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.729
EAT10457.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.711
EAT09380.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.705
EAT10543.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.702
EAT09626.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
 
  0.695
Your Current Organism:
Sphingomonas sp. SKA58
NCBI taxonomy Id: 314266
Other names: S. sp. SKA58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.