STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT09960.1Two component transcriptional regulator, winged helix family protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (234 aa)    
Predicted Functional Partners:
EAT09959.1
COG0642 Signal transduction histidine kinase.
 0.998
EAT10198.1
Sensor histidine kinase; COG2202 FOG: PAS/PAC domain.
 0.980
EAT10222.1
Sensory box histidine kinase/response regulator; COG2203 FOG: GAF domain.
 
 0.980
EAT10585.1
PAS/PAC Sensor Hybrid Histidine Kinase; COG2202 FOG: PAS/PAC domain.
 0.979
EAT08399.1
Sensory box histidine kinase/response regulator; COG2202 FOG: PAS/PAC domain.
 0.979
EAT07139.1
Probable two-component sensor histidine kinase/response regulator hybrid protein; COG2202 FOG: PAS/PAC domain.
 
 0.976
EAT09532.1
Probable transcriptional regulator; COG2202 FOG: PAS/PAC domain.
  
 0.972
EAT07703.1
COG0642 Signal transduction histidine kinase.
 
  0.891
EAT10153.1
COG0642 Signal transduction histidine kinase.
 0.881
EAT09919.1
COG0643 Chemotaxis protein histidine kinase and related kinases.
 
 0.866
Your Current Organism:
Sphingomonas sp. SKA58
NCBI taxonomy Id: 314266
Other names: S. sp. SKA58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.