STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT10063.1COG1629 Outer membrane receptor proteins, mostly Fe transport. (753 aa)    
Predicted Functional Partners:
EAT10541.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.655
EAT07817.1
COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
  0.651
EAT10543.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.631
EAT09406.1
Hypothetical TonB-dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.618
EAT10299.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.605
EAT10300.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.604
EAT08762.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.597
EAT07779.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.596
EAT10417.1
Putative TonB-dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.591
EAT09384.1
Hypothetical protein.
   
  0.587
Your Current Organism:
Sphingomonas sp. SKA58
NCBI taxonomy Id: 314266
Other names: S. sp. SKA58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.