STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT08687.1Tetratricopeptide TPR_4; COG0457 FOG: TPR repeat. (452 aa)    
Predicted Functional Partners:
EAT08689.1
ParA-like protein; COG1192 ATPases involved in chromosome partitioning.
 
     0.896
EAT08688.1
Hypothetical protein.
       0.870
EAT08690.1
Sel1-like repeat protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
 
     0.778
EAT08389.1
Hypothetical protein.
 
     0.771
EAT07803.1
Hypothetical protein.
  
     0.764
EAT08413.1
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.760
EAT07045.1
Hypothetical protein.
  
     0.759
EAT08655.1
Hypothetical protein; COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.
  
     0.757
EAT07674.1
Hypothetical protein.
  
     0.755
EAT07723.1
COG1530 Ribonucleases G and E.
  
     0.751
Your Current Organism:
Sphingomonas sp. SKA58
NCBI taxonomy Id: 314266
Other names: S. sp. SKA58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.