Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAT09552.1 | EAT09553.1 | SKA58_14687 | SKA58_14692 | COG3809 Uncharacterized protein conserved in bacteria. | COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family. | 0.780 |
EAT09552.1 | cysS | SKA58_14687 | SKA58_14697 | COG3809 Uncharacterized protein conserved in bacteria. | COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.441 |
EAT09553.1 | EAT09552.1 | SKA58_14692 | SKA58_14687 | COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family. | COG3809 Uncharacterized protein conserved in bacteria. | 0.780 |
EAT09553.1 | cysS | SKA58_14692 | SKA58_14697 | COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family. | COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.448 |
cysS | EAT09552.1 | SKA58_14697 | SKA58_14687 | COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | COG3809 Uncharacterized protein conserved in bacteria. | 0.441 |
cysS | EAT09553.1 | SKA58_14697 | SKA58_14692 | COG0215 Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family. | 0.448 |