Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAT07569.1 | EAT07668.1 | SKA58_10265 | SKA58_00155 | COG2124 Cytochrome P450. | COG3000 Sterol desaturase. | 0.481 |
EAT07569.1 | EAT09016.1 | SKA58_10265 | SKA58_18042 | COG2124 Cytochrome P450. | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | 0.596 |
EAT07569.1 | EAT09592.1 | SKA58_10265 | SKA58_14887 | COG2124 Cytochrome P450. | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | 0.517 |
EAT07668.1 | EAT07569.1 | SKA58_00155 | SKA58_10265 | COG3000 Sterol desaturase. | COG2124 Cytochrome P450. | 0.481 |
EAT07668.1 | EAT09016.1 | SKA58_00155 | SKA58_18042 | COG3000 Sterol desaturase. | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | 0.592 |
EAT07668.1 | EAT09592.1 | SKA58_00155 | SKA58_14887 | COG3000 Sterol desaturase. | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | 0.605 |
EAT07668.1 | EAT10419.1 | SKA58_00155 | SKA58_01530 | COG3000 Sterol desaturase. | COG2124 Cytochrome P450. | 0.481 |
EAT07668.1 | EAT10501.1 | SKA58_00155 | SKA58_01940 | COG3000 Sterol desaturase. | COG2124 Cytochrome P450. | 0.481 |
EAT09016.1 | EAT07569.1 | SKA58_18042 | SKA58_10265 | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | COG2124 Cytochrome P450. | 0.596 |
EAT09016.1 | EAT07668.1 | SKA58_18042 | SKA58_00155 | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | COG3000 Sterol desaturase. | 0.592 |
EAT09016.1 | EAT09592.1 | SKA58_18042 | SKA58_14887 | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | 0.862 |
EAT09016.1 | EAT10419.1 | SKA58_18042 | SKA58_01530 | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | COG2124 Cytochrome P450. | 0.596 |
EAT09016.1 | EAT10501.1 | SKA58_18042 | SKA58_01940 | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | COG2124 Cytochrome P450. | 0.596 |
EAT09016.1 | coq7 | SKA58_18042 | SKA58_17198 | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis. | 0.793 |
EAT09591.1 | EAT09592.1 | SKA58_14882 | SKA58_14887 | Hypothetical protein. | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | 0.568 |
EAT09591.1 | prfB | SKA58_14882 | SKA58_14892 | Hypothetical protein. | Protein chain release factor B; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA. | 0.568 |
EAT09592.1 | EAT07569.1 | SKA58_14887 | SKA58_10265 | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | COG2124 Cytochrome P450. | 0.517 |
EAT09592.1 | EAT07668.1 | SKA58_14887 | SKA58_00155 | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | COG3000 Sterol desaturase. | 0.605 |
EAT09592.1 | EAT09016.1 | SKA58_14887 | SKA58_18042 | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases. | 0.862 |
EAT09592.1 | EAT09591.1 | SKA58_14887 | SKA58_14882 | Hypothetical protein; COG0500 SAM-dependent methyltransferases. | Hypothetical protein. | 0.568 |
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