STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT08765.1NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (281 aa)    
Predicted Functional Partners:
EAT08769.1
Zinc-containing alcohol dehydrogenase superfamily protein; COG1064 Zn-dependent alcohol dehydrogenases.
   
  0.757
EAT08767.1
COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
    
0.748
EAT09394.1
Glutamate synthase [NADPH] large chain precursor; COG0067 Glutamate synthase domain 1.
     
 0.735
EAT10521.1
Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.717
EAT08766.1
NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
    
0.696
EAT08768.1
Putative transporter; COG0477 Permeases of the major facilitator superfamily.
       0.671
EAT07309.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.654
EAT07128.1
Oxidoreductase; COG3239 Fatty acid desaturase.
   
  0.603
EAT08543.1
Hypothetical protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
  0.603
EAT07800.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.586
Your Current Organism:
Sphingomonas sp. SKA58
NCBI taxonomy Id: 314266
Other names: S. sp. SKA58
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