STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT08928.1Hypothetical protein; Belongs to the UPF0235 family. (107 aa)    
Predicted Functional Partners:
EAT08929.1
Hypothetical protein; COG0762 Predicted integral membrane protein.
 
  
 0.865
EAT08925.1
Multiple antibiotic resistance (MarC)-related proteins; COG2095 Multiple antibiotic transporter.
       0.812
EAT08926.1
Hypothetical protein.
       0.812
folD
Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
       0.812
EAT10067.1
COG3827 Uncharacterized protein conserved in bacteria.
  
     0.592
EAT08930.1
Hypothetical protein.
       0.531
EAT07627.1
Predicted transcriptional regulator.
  
     0.442
EAT09034.1
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
 
  
 0.431
EAT09148.1
Helicase; COG3893 Inactivated superfamily I helicase.
  
     0.415
EAT09830.1
Hypothetical protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
  
     0.406
Your Current Organism:
Sphingomonas sp. SKA58
NCBI taxonomy Id: 314266
Other names: S. sp. SKA58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.