STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT08416.1Integrase/recombinase; COG0582 Integrase. (451 aa)    
Predicted Functional Partners:
EAT08417.1
COG0582 Integrase.
 
     0.949
EAT08415.1
Integrase/recombinase; COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.948
EAT08418.1
COG0582 Integrase; Belongs to the 'phage' integrase family.
 
     0.911
EAT07286.1
COG0582 Integrase.
     0.796
EAT07284.1
Integrase/recombinase; COG0582 Integrase.
 
     0.779
EAT08775.1
COG0582 Integrase; Belongs to the 'phage' integrase family.
  
   
 0.693
EAT10657.1
Hypothetical cytosolic protein.
  
     0.681
EAT10659.1
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
     0.593
EAT08830.1
COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
  
     0.566
EAT08461.1
COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
  
     0.514
Your Current Organism:
Sphingomonas sp. SKA58
NCBI taxonomy Id: 314266
Other names: S. sp. SKA58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.