STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAT08509.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
EAT08508.1
Hypothetical protein.
 
     0.926
EAT08513.1
Hypothetical protein.
 
     0.879
EAT08506.1
Hypothetical protein.
 
     0.839
EAT08510.1
COG3667 Uncharacterized protein involved in copper resistance.
 
     0.816
EAT08516.1
COG0500 SAM-dependent methyltransferases.
 
     0.789
EAT08520.1
Membrane protein; Related to Kef-type K+ transport system NAD-binding component; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
 
     0.776
EAT08511.1
Copper-binding protein; COG2132 Putative multicopper oxidases.
 
     0.753
EAT08512.1
COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.737
EAT07228.1
Putative high-affinity Fe2+/Pb2+ permease; COG2010 Cytochrome c, mono- and diheme variants.
  
     0.684
EAT08524.1
Heavy metal RND efflux outer membrane protein, CzcC family protein; COG1538 Outer membrane protein.
  
     0.677
Your Current Organism:
Sphingomonas sp. SKA58
NCBI taxonomy Id: 314266
Other names: S. sp. SKA58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.