Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDZ40903.1 | EDZ41396.1 | RB2083_417 | RB2083_910 | Iron-sulfur cluster-binding protein; [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase. | Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family. | 0.982 |
| EDZ40903.1 | EDZ41620.1 | RB2083_417 | RB2083_1134 | Iron-sulfur cluster-binding protein; [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase. | Molybdopterin oxidoreductase Fe4S4 domain family; [C] COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.981 |
| EDZ40903.1 | EDZ43943.1 | RB2083_417 | RB2083_3458 | Iron-sulfur cluster-binding protein; [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase. | 4Fe-4S binding domain protein; [C] COG1145 Ferredoxin. | 0.862 |
| EDZ40903.1 | dmsC | RB2083_417 | RB2083_1645 | Iron-sulfur cluster-binding protein; [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase. | [R] COG3302 DMSO reductase anchor subunit. | 0.593 |
| EDZ40903.1 | fdhB_2 | RB2083_417 | RB2083_1790 | Iron-sulfur cluster-binding protein; [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase. | Formate dehydrogenase Fe-S subunit; [C] COG0437 Fe-S-cluster-containing hydrogenase components 1. | 0.972 |
| EDZ41396.1 | EDZ40903.1 | RB2083_910 | RB2083_417 | Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family. | Iron-sulfur cluster-binding protein; [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase. | 0.982 |
| EDZ41396.1 | EDZ41611.1 | RB2083_910 | RB2083_1125 | Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family. | Conserved hypothetical protein. | 0.755 |
| EDZ41396.1 | EDZ41620.1 | RB2083_910 | RB2083_1134 | Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family. | Molybdopterin oxidoreductase Fe4S4 domain family; [C] COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.971 |
| EDZ41396.1 | EDZ43943.1 | RB2083_910 | RB2083_3458 | Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family. | 4Fe-4S binding domain protein; [C] COG1145 Ferredoxin. | 0.617 |
| EDZ41396.1 | fdhB_2 | RB2083_910 | RB2083_1790 | Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family. | Formate dehydrogenase Fe-S subunit; [C] COG0437 Fe-S-cluster-containing hydrogenase components 1. | 0.617 |
| EDZ41396.1 | tuf_1 | RB2083_910 | RB2083_1726 | Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family. | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.481 |
| EDZ41396.1 | tuf_2 | RB2083_910 | RB2083_3074 | Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family. | [J] COG3276 Selenocysteine-specific translation elongation factor. | 0.481 |
| EDZ41611.1 | EDZ41396.1 | RB2083_1125 | RB2083_910 | Conserved hypothetical protein. | Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family. | 0.755 |
| EDZ41611.1 | EDZ41620.1 | RB2083_1125 | RB2083_1134 | Conserved hypothetical protein. | Molybdopterin oxidoreductase Fe4S4 domain family; [C] COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.971 |
| EDZ41611.1 | EDZ43943.1 | RB2083_1125 | RB2083_3458 | Conserved hypothetical protein. | 4Fe-4S binding domain protein; [C] COG1145 Ferredoxin. | 0.937 |
| EDZ41611.1 | EDZ44055.1 | RB2083_1125 | RB2083_3570 | Conserved hypothetical protein. | Cytochrome c, class I; [C] COG3474 Cytochrome c2. | 0.998 |
| EDZ41611.1 | dmsC | RB2083_1125 | RB2083_1645 | Conserved hypothetical protein. | [R] COG3302 DMSO reductase anchor subunit. | 0.859 |
| EDZ41611.1 | fdhB_2 | RB2083_1125 | RB2083_1790 | Conserved hypothetical protein. | Formate dehydrogenase Fe-S subunit; [C] COG0437 Fe-S-cluster-containing hydrogenase components 1. | 0.937 |
| EDZ41611.1 | soxE | RB2083_1125 | RB2083_1713 | Conserved hypothetical protein. | [C] COG2863 Cytochrome c553. | 0.947 |
| EDZ41611.1 | tuf_1 | RB2083_1125 | RB2083_1726 | Conserved hypothetical protein. | Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. | 0.816 |
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