STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41627.1Molybdopterin oxidoreductase Fe4S4 domain family; [C] COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (964 aa)    
Predicted Functional Partners:
fdhB_1
Formate dehydrogenase, beta subunit; [O] COG0443 Molecular chaperone.
 
 0.997
fdhB_2
Formate dehydrogenase Fe-S subunit; [C] COG0437 Fe-S-cluster-containing hydrogenase components 1.
 
 
 0.990
nuoF
NADH oxidoreductase (quinone), F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.
  
 0.983
EDZ41589.1
Conserved hypothetical protein; [C] COG1145 Ferredoxin.
  
 0.972
EDZ40903.1
Iron-sulfur cluster-binding protein; [G] COG0676 Uncharacterized enzymes related to aldose 1-epimerase.
 
  
 0.969
nuoE_1
NADH dehydrogenase-ubiquinone oxidoreductase, chain e; [C] COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.
  
 0.947
EDZ43943.1
4Fe-4S binding domain protein; [C] COG1145 Ferredoxin.
  
 
 0.931
nuoI
NADH-ubiquinone oxidoreductase (complex i) subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 0.925
fdhD
Formate dehydrogenase accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
 
 
 0.901
EDZ41415.1
Chaperone, TorD family; [R] COG3381 Uncharacterized component of anaerobic dehydrogenases.
 
   
 0.899
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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