STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41661.1Conserved hypothetical protein. (126 aa)    
Predicted Functional Partners:
EDZ44211.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  0.869
EDZ44082.1
Hemolysin-type calcium-binding region; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
  0.784
EDZ42559.1
Conserved hypothetical protein.
 
 
   0.737
EDZ42396.1
Type I secretion target repeat protein.
 
 
  0.730
EDZ43876.1
Conserved hypothetical protein.
  
     0.727
EDZ44315.1
Conserved hypothetical protein.
  
     0.673
EDZ43554.1
core-2/I-branching enzyme family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.661
EDZ40624.1
Conserved hypothetical protein.
  
     0.653
EDZ42235.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.646
EDZ44639.1
Peptidoglycan-binding domain 1.
  
     0.631
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.