Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDZ40605.1 | EDZ40706.1 | RB2083_119 | RB2083_220 | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase. | 0.689 |
| EDZ40605.1 | EDZ40966.1 | RB2083_119 | RB2083_480 | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | Transposase; [L] COG3547 Transposase and inactivated derivatives. | 0.437 |
| EDZ40605.1 | EDZ42035.1 | RB2083_119 | RB2083_1550 | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | Bordetella uptake gene product superfamily; [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.948 |
| EDZ40605.1 | EDZ43636.1 | RB2083_119 | RB2083_3151 | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | Bordetella uptake gene family protein; [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.976 |
| EDZ40605.1 | EDZ44374.1 | RB2083_119 | RB2083_3889 | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.991 |
| EDZ40605.1 | EDZ44447.1 | RB2083_119 | RB2083_3962 | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | Extracellular solute-binding protein, family 1; [P] COG1840 ABC-type Fe3+ transport system, periplasmic component. | 0.604 |
| EDZ40605.1 | tctD | RB2083_119 | RB2083_375 | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | Two-component system regulatory protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.532 |
| EDZ40706.1 | EDZ40605.1 | RB2083_220 | RB2083_119 | Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase. | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.689 |
| EDZ40706.1 | EDZ43636.1 | RB2083_220 | RB2083_3151 | Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase. | Bordetella uptake gene family protein; [S] COG3181 Uncharacterized protein conserved in bacteria. | 0.879 |
| EDZ40706.1 | EDZ44374.1 | RB2083_220 | RB2083_3889 | Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.877 |
| EDZ40706.1 | EDZ44447.1 | RB2083_220 | RB2083_3962 | Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase. | Extracellular solute-binding protein, family 1; [P] COG1840 ABC-type Fe3+ transport system, periplasmic component. | 0.996 |
| EDZ40706.1 | tctD | RB2083_220 | RB2083_375 | Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase. | Two-component system regulatory protein; [TK] COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. | 0.993 |
| EDZ40966.1 | EDZ40605.1 | RB2083_480 | RB2083_119 | Transposase; [L] COG3547 Transposase and inactivated derivatives. | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.437 |
| EDZ40966.1 | EDZ44374.1 | RB2083_480 | RB2083_3889 | Transposase; [L] COG3547 Transposase and inactivated derivatives. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.437 |
| EDZ42035.1 | EDZ40605.1 | RB2083_1550 | RB2083_119 | Bordetella uptake gene product superfamily; [S] COG3181 Uncharacterized protein conserved in bacteria. | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.948 |
| EDZ42035.1 | EDZ44374.1 | RB2083_1550 | RB2083_3889 | Bordetella uptake gene product superfamily; [S] COG3181 Uncharacterized protein conserved in bacteria. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.888 |
| EDZ43636.1 | EDZ40605.1 | RB2083_3151 | RB2083_119 | Bordetella uptake gene family protein; [S] COG3181 Uncharacterized protein conserved in bacteria. | TctA protein; [S] COG3333 Uncharacterized protein conserved in bacteria. | 0.976 |
| EDZ43636.1 | EDZ40706.1 | RB2083_3151 | RB2083_220 | Bordetella uptake gene family protein; [S] COG3181 Uncharacterized protein conserved in bacteria. | Sensor histidine kinase; [T] COG0642 Signal transduction histidine kinase. | 0.879 |
| EDZ43636.1 | EDZ44374.1 | RB2083_3151 | RB2083_3889 | Bordetella uptake gene family protein; [S] COG3181 Uncharacterized protein conserved in bacteria. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.987 |
| EDZ43636.1 | EDZ44447.1 | RB2083_3151 | RB2083_3962 | Bordetella uptake gene family protein; [S] COG3181 Uncharacterized protein conserved in bacteria. | Extracellular solute-binding protein, family 1; [P] COG1840 ABC-type Fe3+ transport system, periplasmic component. | 0.840 |
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