STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41856.1Heme NO binding domain protein. (113 aa)    
Predicted Functional Partners:
EDZ41212.1
Diguanylate cyclase; [T] COG2199 FOG: GGDEF domain.
 
  
 0.992
EDZ42781.1
Serine-protein kinase, putative.
  
    0.991
EDZ43466.1
Response regulator; [LKJ] COG0513 Superfamily II DNA and RNA helicases.
  
  
 0.991
EDZ42402.1
Anti-sigma-factor antagonist; [T] COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); Belongs to the anti-sigma-factor antagonist family.
 
    0.988
flgB_2
[N] COG1815 Flagellar basal body protein.
   
    0.963
EDZ42586.1
[H] COG0352 Thiamine monophosphate synthase.
  
  
 0.948
EDZ43828.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
  
  
 0.946
EDZ41741.1
Hpt protein.
 
    0.932
EDZ40905.1
[T] COG2200 FOG: EAL domain.
 
  
 0.908
EDZ42768.1
Aerobic respiration control sensor protein ArcB, putative; [T] COG0642 Signal transduction histidine kinase.
  
  
 0.891
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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