STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41955.1Hypothetical protein. (358 aa)    
Predicted Functional Partners:
EDZ40769.1
Caax amino terminal protease family protein; [R] COG1266 Predicted metal-dependent membrane protease.
  
  
 0.880
EDZ42654.1
YcaO-like family; [S] COG1944 Uncharacterized conserved protein.
     
 0.809
EDZ41836.1
Hypothetical protein.
       0.746
EDZ43378.1
[C] COG0778 Nitroreductase.
  
  
 0.739
EDZ41977.1
ABC-2 type transporter; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 0.622
EDZ43511.1
ABC-2 type transporter; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
  
 0.622
bluB
cob(II)yrinic acid a,c-diamide reductase; [C] COG0778 Nitroreductase.
  
  
 0.514
EDZ40612.1
[C] COG0778 Nitroreductase.
  
  
 0.514
EDZ43162.1
[C] COG0778 Nitroreductase.
  
  
 0.514
EDZ43473.1
Nitroreductase family protein; [H] COG0212 5-formyltetrahydrofolate cyclo-ligase.
  
  
 0.514
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.