STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41979.1[T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins. (146 aa)    
Predicted Functional Partners:
EDZ42768.1
Aerobic respiration control sensor protein ArcB, putative; [T] COG0642 Signal transduction histidine kinase.
  
  
 0.666
hpf
Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
   
  
 0.618
EDZ42953.1
Trap dicarboxylate transporter- dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components.
       0.553
EDZ41573.1
[L] COG0350 Methylated DNA-protein cysteine methyltransferase.
  
    0.540
EDZ42547.1
Transcriptional regulator, AraC family; [L] COG3695 Predicted methylated DNA-protein cysteine methyltransferase.
  
    0.540
deoA
Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
   
    0.539
EDZ43103.1
ubiquinol-Cytochrome c reductase, iron-sulfur subunit; [S] COG2947 Uncharacterized conserved protein.
   
    0.495
groL_2
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.493
groL_1
Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
   
 
 0.493
ppk_1
Polyphosphate kinase 2; [S] COG2326 Uncharacterized conserved protein.
   
    0.487
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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