STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ40647.1Conserved hypothetical protein. (972 aa)    
Predicted Functional Partners:
EDZ41795.1
Glycosyl transferase, group 2 family protein; [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
     0.820
EDZ41804.1
Exopolysaccharide biosynthesis domain protein; [D] COG0489 ATPases involved in chromosome partitioning.
 
  
 0.818
EDZ43208.1
Conserved hypothetical protein.
 
     0.817
EDZ44425.1
Luciferase-like monooxygenase family; [Q] COG1020 Non-ribosomal peptide synthetase modules and related proteins.
 
   
 0.813
EDZ43274.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
 
  
 0.802
EDZ43790.1
[Q] COG2977 Phosphopantetheinyl transferase component of siderophore synthetase; Belongs to the P-Pant transferase superfamily.
 
     0.782
EDZ43564.1
Polysaccharide biosynthesis protein; [E] COG0722 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase.
 
     0.777
EDZ42661.1
Lipopolysaccharide biosynthesis; [M] COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
     0.776
EDZ42177.1
Glycosyl transferase, family 2.
  
     0.774
EDZ43786.1
Glycosyl transferase, group 1 family protein; [G] COG0297 Glycogen synthase.
  
  
  0.773
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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