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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ42148.1[GEPR] COG0477 Permeases of the major facilitator superfamily. (409 aa)    
Predicted Functional Partners:
EDZ44642.1
[S] COG3022 Uncharacterized protein conserved in bacteria; protein RD1_0358; Belongs to the UPF0246 family.
  
    0.872
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
       0.827
EDZ43620.1
Conserved hypothetical protein.
       0.549
EDZ44401.1
Cl- channel, voltage gated; [P] COG0038 Chloride channel protein EriC.
  
     0.493
EDZ43225.1
Integral membrane protein; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
  
     0.478
EDZ43711.1
OmpA/MotB; [P] COG0226 ABC-type phosphate transport system, periplasmic component.
  
     0.443
flgG_1
[N] COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.420
flgF
[N] COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.420
flgG_2
[N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.420
EDZ42271.1
Von Willebrand factor type A domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.401
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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