STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ42158.1Conserved hypothetical protein. (83 aa)    
Predicted Functional Partners:
sdhC_1
[C] COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
  
 0.999
sdhC_2
[C] COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
  
 0.997
frdB
[C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit.
  
 0.995
sdhA
Succinate dehydrogenase, flavoprotein subunit; [H] COG0029 Aspartate oxidase; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.992
sdhB
[C] COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.991
EDZ43094.1
3-ketosteroid dehydrogenase, putative; [H] COG0029 Aspartate oxidase.
  
 0.985
sucC_2
succinyl-CoA synthase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 
 0.971
RB2083_49
[C] COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
    
  0.970
EDZ43328.1
Hydrolyase, tartrate/fumarate subfamily, alpha subunit; [C] COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain.
  
 
 0.969
EDZ43973.1
Fe-S type hydro-lyases tartrate/fumarate beta protein; [C] COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain.
  
 
 0.968
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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