STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ42226.1DNA-binding protein; [K] COG1396 Predicted transcriptional regulators. (190 aa)    
Predicted Functional Partners:
EDZ43420.1
Glycine cleavage T-protein (aminomethyl transferase); [E] COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
 
 0.821
EDZ42337.1
Lysine exporter protein; [E] COG1280 Putative threonine efflux protein.
 
     0.817
EDZ41141.1
Glycine cleavage T-protein (aminomethyl transferase); [E] COG0665 Glycine/D-amino acid oxidases (deaminating); Belongs to the GcvT family.
 
 
 0.766
EDZ42058.1
Transcriptional regulator, XRE family with cupin sensor domain; [K] COG1396 Predicted transcriptional regulators.
 
0.749
EDZ43957.1
DNA-binding protein; [K] COG1396 Predicted transcriptional regulators.
 
 
 0.741
nadE
Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
 0.666
EDZ43662.1
Transcriptional regulator, GntR family; [K] COG2188 Transcriptional regulators.
  
  
 0.652
EDZ44318.1
Transcriptional regulator, GntR family; [K] COG2188 Transcriptional regulators.
  
  
 0.652
EDZ43547.1
Acetyltransferase, putative; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
    
  0.646
EDZ41983.1
[T] COG1956 GAF domain-containing protein.
       0.611
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.